82. "Bisindolizine: A new AIEgen and its application in latent fingerprint imaging" V. Arun, Eunsu Kim, Youngjun Lee, Eunha Kim* 2025, Submitted

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81. "A Novel RAGE Modulator Induces Soluble RAGE to Reduce BACE1 Expression in Alzheimer's Disease" Advanced Science  2025, ASAP DOI: 10.1002/advs.202407812

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80. "An easy access to bioorthogonal click-to-release reagent bishydroxy-trans-cyclooctene (C2TCO) and harnessed its rapid labeling and dissecting feature in multicycle imaging" Arun V, Minju Lee, Hongseo Choi, Wook Kim*, Eunha Kim* 2024, Submitted

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79. Small Molecule Inhibitors of IL-1R1/IL-1β Interaction identified via Transfer Machine Learning QSAR Modelling. Farzana Yasmeen, Muhammad Haseeb, Nasir Javaid, Eunha Kim, Sangdun Choi*. International Journal of Biological Macromolecules 2024, 282, 137295.​

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78. Unveiling the therapeutics potential of luteolin for cancer and other disorders through bioinformatics target validation.  RAJATH R, Abdul Manan Mughal, Naila Qayyum, Eunha Kim, Sangdun Choi*. 2024, Submitted

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77. Hypnotic effect of AR-001 through adenosine A1 receptor. Suyeon Kim†, Hye Jin Jee†, Ju-Young Park, Sung Hun Bae, So Hee Kim, Eunha Kim*, Sunghou Lee*, Yi-Sook Jung* European Journal of Pharmacology, 2024, 981, 176847. DOI: 10.1016/j.ejphar.2024.176847. († These authors equally contributed to this work) 

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76. Bioorthogonal imaging probe for STING protein in live cell and fixed tissue. Heylim Lee,† Juyoung Park,† Jubeen Yoon, Wonjin Park, Miso Kang, Jeehee Lee, Gyubin Park, Minseob Koh, Hyejin Kim, Chang Ho Sohn, Sanghee Lee*, Eunha Kim* Sensors and Actuators B: Chemical  2024, 412, 135773. DOI:10.1016/j.snb.2024.135773

(† These authors equally contributed to this work) 

​

75. "Investigation of proteome-tetrazine reactivity for a highly selective tetrazine ligation in live cells" Juhee Hahm,† Junyoung Park,† Hyelim Lee, Hwan Min Hwang, Soyeon Lee, Ju-Young Park, Arun V, Sanghee Lee*, Eunha Kim* Jongmin Park* 2024 Submitted  († These authors equally contributed to this work) 

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74. "Fixative eXchange (FX)-seq: scalable single nucleus RNA sequencing enables profiling oftranscriptomes of heavily PFA-fixed or FFPE mouse and human tissues." Han-Eol Park,† Yu Tak Lee,† Junsuk Lee, Hyelin Ji, Young-Lan Song, Jaewon Lee, Sung-Yon Kim, Junho K. Hur, Eunha Kim, Chung Whan Lee, Yoon Dae Han, Hyunki Kim, and Chang Ho Soh* 2024 In revision. († These authors equally contributed to this work) 

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73. "All-in-one organic ligand for emitting perovskite nanocrystals: Efficient dispersion, photocurable and charge transporting capability" Na Young Cho, Ji Won Jang, Byeong M. Oh, Gyeong Eun Seok, Haewoon Seo, Sang-Wook Kim, Jincheol Kim, Eunsu Kim, Eunha Kim, Hyosung Choi, Bo Ram Lee, Jin Woo Choi*, Jong H. Kim*. Chem. Eng. J. 2024, 485, 149792. DOI: 10.1016/j.cej.2024.149792

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72. In-situ wound healing by SDF-1-mimic peptide-loaded click crosslinked hyaluronic acid scaffold. Young Hun Kim; Shina Kim; Min Ji Han; Hyun Jin Ju; Yongdoo Park; Eunha Kim; Hak Soo Choi; Sangdun Choi, Moonsuk Kim*. J. Control. Release 2023, 364, 420-434. DOI:10.1016/j.jconrel.2023.10.047

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71. Microtubule-destabilizing agents enhance STING-mediated innate immune response via biased mechanism in human monocyte cells. Songhyun Lim, Hee Ra Jung, Hyelim Lee, Yeonjeong Chu, Hyejin Kim, Eunha Kim, Sanghee Lee* Biomedicine & Pharmacotherapy 2023, 169, 115883. DOI:10.1016/j.biopha.2023.115883

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70. "Pure-Water-Soluble Colorimetric Chemosensors for Highly Sensitive and Rapid Detection of Hydrogen Sulfide: Applications to Evaluation of On-Site Water Quality and Real-Time Gas Sensors" H.W. Chun,† J. Zheng,† E.H. Lee, B. M. Oh, C.-B. Lee, J.S. Min, E. Kim, W. Lee, J. H. Kim* Sensors and Actuators B: Chemical  2023, 402, 134989. DOI:10.1016/j.snb.2023.134989

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69. "Development of a Novel HDAC inhibitor Exhibiting Therapeutic Potential to Prevent Depression via HDAC11 inhibition in Microglia" Baek, S. Y.; Kim, T.; Lee, H.; Lee, J.; Choi, H.-S.; Koh, M.; Kim, E.; Jung, M. E.; Iliopoulos, D.; Lee, J.-Y.; Kim, J.*; Lee, S.* Biomedicine & Pharmacotherapy 2023 DOI: 10.1016/j.biopha.2023.115312

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68. "Redirection of CAR-T cell cytotoxicity using metabolic glycan labeling with unnatural sugars" Cha, J. H.†; Kim, E.†; Lee, J.; Kim, E.*; Kim, C.H.*​ J. Med. Chem. 2023, 66, 12, 7804–7812. DOI: 10.1021/acs.jmedchem.3c00048

​

67. "Indolizine-based fluorescent compounds array for noninvasive monitoring of glucose in bio-fluids using on-device machine learning" Kim, H.†; Lee, S.†; Lee, K. W.; Ko, J.*; Yoon, H. C.*; Kim, E.* Dyes and Pigments 2023, 215, 111287. DOI: 10.1016/j.dyepig.2023.111287   († These authors equally contributed to this work) 

 

66. "Synthesis of 1-(5-(4-Chlorophenyl)-1-(2,4-dichlorophenyl)-4-methyl-1H-pyrazol-3-yl)-2-morpholinoethane-1,2-dione Analogues and their Inhibitory Activities with Reduced Cytotoxicity in Lipopolysaccharide-Induced BV2 Cells" Yoon, S.-H.; Cho, D.-Y.; Han, J.-H.; Cho, D.-K.; Kim, E.; Park, J.-Y.*​ Bioorganic & Medicinal Chemistry Letters 79, 129061, 2023, DOI: 10.1016/j.bmcl.2022.129061

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65. "N4-phenylquinazoline-4,6-diamine as a tunable fluorescent scaffold for the development of fluorescent probes" Lee, J.†;  Aslam, A.†; Choi, S.†; Lim, W.; Jung Y. M.; Yoo, H. S.; Park, J. H.; Lee, S.; Kim, E.*; Park, J.* Dyes and Pigments 2023, 210, 110987. DOI:10.1016/j.dyepig.2022.110987 († These authors equally contributed to this work) 

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64. "Self-assembled hyaluronic acid nanomedicine as a topical therapeutic agent for targeted modulation of dysregulated skin barrier and immune responses in a mouse model of psoriasis" Lee, W. H.; Rho, J. G.; Yang, Y. Y.; Lee, S.; Kweon, S.; Kim, H.-M.; Yoon, J.; Choi, H.; Kim, S. H.; You, S.; Song, Y.; Oh, Y. S.; Kim, H.; Han, H. S.; Han, J. H.; Jung, M.; Park, Y. H.; Choi, Y. S.; Han, S.; Lee, J.; Choi, S.; Kim, J.-W.; Park, J. H.; Lee, E. K.; Song, W. K.; Kim, E.*; Kim, W.*​ ACS Nano 16, 12, 20057-20074. 2022, DOI: 10.1021/acsnano.2c07843

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63. "­Single-molecule sensing of an anticancer therapeutic protein-protein interactions using the chemically modified OmpG nanopore" Hwang, H.-J.‡; Kim, J.-S.‡; Lee, J.; Min, J.S.; Kim, E.*; Lee, M.-K.*; Chi, S.-W.* Analytical Chemistry 2022 94, 21, 7449-7454. († These authors equally contributed to this work) 

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62. "Synthesis and biological evaluation of aripiprazole derivatives as potential antituberculosis agents." Reddy, B. R.*;  Gajulapalli, V. P. R., Krishna, V. S.; Sriram, D.; Babu, K. S.; Kim, E.* Results in Chemistry 2022, 4, 100295. DOI: 10.1016/j.rechem.2022.100295

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61. "Harnessing aggregation-induced emission property of indolizine derivative as a fluorogenic bioprobe for endoplasmic reticulum” Arun, V.; Choi, S.; Choi, J.*; Kim, J.*; Kim, E.* Dyes and Pigments 2022, 200, 110118. DOI:10.1016/j.dyepig.2022.110118

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60. "Recent trends in molecular aggregates: a path to explore bio-medicine" Heo, J.; Murale, D. P.; Yoon, H. Y.; Arun, V.; Choi, S.; Kim, E.*; Lee, J.-S.*; Kim, S.* Aggregate 2022, 3, e159. DOI:10.1002/agt2.159

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59. "Development of small-molecule STING activator for cancer immunotherapy" Jung, H. R.; Jo, S.; Jeon, M. J.; Lee, H.; Chu, Y.; Lee, J.; Kim, E.; Jung, C.; Kim, H.*; Lee, S.* Biomedicines 2022, 10(1), 33. DOI: 10.3390/biomedicines10010033

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58. "Fluorescent materials for monitoring mitochondrial biology" " Chu, Y.; Park, J.; Kim, E.*; Lee, S.* Materials 2021, 14(15), 4180. DOI: 10.3390/ma14154180

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Special Issue "Biomaterials and Molecular Imaging Materials for Biomedical Research"

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57. "Highly Sensitive, Selective, and Rapid Response Colorimetric Chemosensor for Naked Eye Detection of Hydrogen Sulfide Gas under Versatile Conditions: Solution, Thin-Film, and Wearable Fabric" Zheng, J.; Noh, H. L.; Chun, H. W.; Oh, B. M.; Lee, J.; Choi, S.-K.; Kim, E.; Jung, D.; Lee, W. S.; Kim, J. H.* Sensors and Actuators B: Chemical 2021, 341, 130013.

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56. "Overview of Syntheses and Molecular‐Design Strategies for Tetrazine‐Based Fluorogenic Probes." Choi, S.-K.; Kim, J.*; Kim, E.* Molecules, 2021 26(7), 1868. DOI: 10.3390/molecules26071868.

 

Special issue "Tetrazines: A World of New Molecules Emerging from Old Chemistry"

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55. Synthesis and Biological Evaluation of Salicylic Acid Analogues of Celecoxib as a New Class of Selective Cyclooxygenase-1 Inhibitor. Yoon, S.-H.; Cho, D.-Y.; Choi, S.-Y.; Lee, J. -Y.; Choi, D.-K.; Kim, E.; Park, J.-Y.* Biological and pharmaceutical Bulletin 2021, 44(9), 1230-1238. DOI:10.1248/bpb.b20-00991

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54. "A Tetrazine fused-aggregation induced emission luminogen for bioorthogonal fluorogenic molecular bioimaging." Choi, S.; Choi, S.; Lee. Y.; Lee, S.; Kim, W.; Kim, E* Sensors and Actuators B: Chemical  2021, 340, 129966. DOI:10.1016/j.snb.2021.129966.

53. "Fluorescent sensor array for high-precision pH discrimination with mobile-device readout assisted by machine learning." Kim, H.†; Lee, S.†; Min, J.S.; Kim, E.; Ko, J.*; Kim, E* Dyes and Pigments 2021, 193, 109492. DOI: 10.1016/j.dyepig.2021.109492

(† These authors equally contributed to this work) 

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52. "Self-Assembled Hyaluronic Acid Nanoparticles for Osteoarthritis Treatment”, Kang, L.-J.; Yoon, J.; Han, H. S.; Lee, S.; Kim, E.; Kim, S. J.; Lim, T.; Park, J. H.; Yang, S.; Kim, W., Biomaterials 2021, 275, 120967  DOI: 10.1016/j.biomaterials.2021.120967

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51. "A small molecule interferon inducer for cancer immunotherapy targeting non T cell inflamed tumors" Kim, E.; Lee, S.* Journal of Cancer Immunology 2021, 3(1), 13

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50. "Fluorescent Fluoride Sensor Based on Indolizine Core Skeleton for Bioimaging." Kim, H.; Shin, M.; Kim, E.* Bull. Kor. Chem. Soc. 2021 42 (1), 95-98. DOI: 10.1002/bkcs.12134

• Invited article. Special issue "Chemosensor and Imaging probes"

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49. "Synthesis of 4-(3-Oxo-3-phenylpropyl)morpholin-4-ium Chloride Analogues and their Inhibitory Activities of Nitric Oxide Production in Lipopolysaccharide-Induced BV2 Cells" Yoon, S.-H.; Lee, E.; Cho, D.-Y.; Ko H. M.; Baek, H. Y.; Choi, D.-K.; Kim, E.; Park, J.-Y.* Bioorg. Med. Chem. Lett. 2021, 36, 127780.  DOI:10.1016/j.bmcl.2021.127780

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48. "In vivo vocal fold augmentation using an injectable polyethylene glycol hydrogel based on click chemistry" Kwon, S.; Choi, H.; Park, C.; Choi, S.; Kim, E.; Kim, S. W.; Kim, C.-S.; Koo, H.* Biomaterials Science 2021, 9, 108-115.

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47.  "VOCkit: A Low-Cost IoT Sensing Platform for Volatile Organic Compound Classification" Ahn, J.; Kim, H.; Kim, E.*; Ko. J.* Ad Hoc Networks 2021, 113(15), 102360

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46. "Kaleidoscopic fluorescent arrays for high-multiplexed point-of-care chemical sensing" Kim, H.†; Choi, S.-K.†; Ahn, J.†; Yu, H.; Min, K.; Hong, C.; Shin, I.-S.; Lee, S.; Lee, H.; Im, H.*; Ko, J.*; Kim, E.* Sensors and Actuators B: Chemical 2021, 329, 129248. († These authors equally contributed to this work) DOI: 10.1016/j.snb.2020.129248

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45.  "Design, synthesis, and biological evaluation of N-arylpiperazine derivatives as interferon inducers" Chu, Y.†; Gajulapalli, V. P. R.†; Kim, E.*; Lee, S*.  Bioorgnic and Medicinal Chhemistry Letter 2020, 30(24), 127613.  DOI:10.1016/j.bmcl.2020.127613

(† These authors equally contributed to this work)

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44. "Full Color Tunable Aggregation-Induced Emission Luminogen for Bioimaging Based on an Indolizine Molecular Framework" Choi, S.-K.; Rho, J.; Yoon, S. E.; Yoon, W.; Kim, J.; Yun, H.; Kim, W.; Kim, E.* Bioconjugate Chemistry. 2020, 31(11), 2522-2532. DOI: 10.1021/acs.bioconjuchem.0c00467 

• Cover article

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43. A Novel small-molecule inhibitor of endosomal TLRs reduces inflammation and alleviates autoimmune disease symptoms in murine models. Patra, M. C.; Achek, A.; Panneerselvam, S.; Shin, H.-J.; Baek, W.-Y.; Lee, W. H.; Sung, J.; Cho, E.-Y.; Kim, G.-Y.; Kim, W.; Kim, E.; Suh, C.-H.; Choi, S.* 2020 Cells 9(7), E1648. DOI:10.3390/cells9071648 PMID: 32660060

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42. Near-infrared light-triggered photodynamic therapy and immune response using upconversion nanoparticles with dual photosensitizers. Lee, S. Y.; Lee, R.; Kim, E.; Lee, S.*; Park, Y. I.* Frontiers in Bioengineering and Biotechnology 2020 DOI:10.3389/fbioe.2020.00275. PMID: 32373598

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41. A Dodecapeptide Selected by Phage Display as a Potential Theranostic Probe for Colon Cancers. Kwak, M.H.; Yi, G.; Yang, S. M.; Choe, Y.; Choi, S.; Kim, E.; Na, K.; Choi, M.-G.; Koo, H.; Park, J. M.* 2020 Translational Oncology 13(9), 100798. DOI: 10.1016/j.tranon.2020.100798. PMID: 32454443

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40. Intravital longitudinal imaging of hepatic lipid droplet accumulation in a murine model for nonalcoholic steatohepatitis. Moon, J.; Kong, E.; Lee, J.; Jung, J.; Kim, E.; Park, S. B.; Kim, P.* Biomedical Optics Express 2020, 11, 5132-5146  

• Editor's Pick

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39. Click chemistry-mediated tumor-targeting of SN38-loaded nanoparticles using trastuzumab. Yoo, J.; Choi, S.; Son, J.; Yi, G.; Kim, E.; Koo, H.* Biochem. Biophys. Res. Commun 2019, 515(1), 207-213. DOI: 10.1016/j.bbrc.2019.05.128. PMID:31146921

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38. Development of Azo-Based Turn-On Chemical Array System for Hydrazine Detection with Fluorescence Pattern Analysis. Shin, M. C.†; Lee, Y.†; Park, S. B.*; Kim, E.* ACS Omega 2019, 4(12), 14875–14885. DOI:10.1021/acsomega.9b01487, PMC6751537 

(† These authors equallycontributed to this work) 

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37. Development of theragnostic tool using Near-IR fluorescent probe targeting mitochondria in brain tumor. Chu, Y.; Shin, M. C.; Sung, J.; Park, J.; Kim, E.*; Lee, S.* Bioconjugate Chem. 2019, doi.org/10.1021/acs.bioconjchem.9b00375

 

36. "Designing a Low-Cost IoT Sensing Platform for VOC Material Classification." Ahn, J.; Kim, H.; Kim, E.; Ko, J. IEEE DCOSS 2019, 8, 82-89.

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35. Biomedical applications of copper-free click chemistry: in vitro, in vivo and ex vivo. Kim, E.; Koo, H.* Chemical Science 2019, 10, 7835-7851. DOI: 10.1039/c9sc03368h 

• Cover article. 

• Most popular 2019-2020 review articles, 

• Most popular 2019-2020 chemical biology articles

• Celebrating Chemical Science in Korea

• Most popular 2018-2019 review articles

• Most popular 2018-2019 chemical biology articles

 

34. "A new-infrared probe targeting mitochondria via regulation of molecular hydrophobicity." Sung, J.†; Rho, J. G.†; Jeon, G. G.; Chu, Y.; Min, J. S.; Lee, S.; Kim, J. H.; Kim, W.*; Kim, E.* Bioconjugate Chem. 2019, 30, 210-217. († These authors equally contributed to this work)

• ACS Editors' Choice

 

33. "Template-Free anion-controlled synthesis of Pd(II) nano-aggregates for the Antifouling Polymerization of CO and Ethylene." Lim, Y.-N.; Chae, S. K.; Yim, W.; Park, J.; Kim, E.; Son, S. U.*; Jang, H.-Y.* Appl. Organomet. Chem. 2019,  DOI: https://doi.org/10.1002/aoc.4761

 

32. "Volatile Organic Compounds Recognition Using a Smartphone Camera and Fluorometric Sensors." Ahn, J.; Kim, H.; Kim, E.; Ko, J. Workshop on Combining Physical and Data-driven Knowledge in Ubiquitous Computing

(Co-located with ACM Ubicomp) 2018 Singapore. - Conference and Workshop Proceeding

 

31. "Near infrared fluorescent tracer for glucose uptake monitoring in live cell." Jo, A.†; Sung, J.†; Lee, S.; Nam, S.; Lee, H. W.; Park, J.; Kim, H.; Kim, E.*; Park, S. B.*  Bioconjugate Chem 2018, 29, 3394-3401. († These authors equally contributed to this work) DOI: 10.1021/acs.bioconjchem.8b00558, PMID:30183256

 

30. "Multiplexed Profiling of Single Extracellular Vesicles" Lee, K.†; Fraser, K.†; Ghaddar, B.; Yang, K.; Kim, E.; Balaj, L.; Chiocca, E. A.; Breakefield, X. O.; Lee, H.*; Weissleder, R.* ACS Nano 2018, 12(1), 494-503. DOI:10.1021/acsnano.7b07060. († These authors equally contributed to this work)

 

29. "Mono-chromophore Design Strategy for Tetrazine-based Colorful Bioorthogonal Probes with a Single Fluorescent Core Skeleton" Lee, Y.; Cho, W.; Sung, J.; Kim, E.*; Park, S. B.*  J. Am. Chem. Soc., 2018, 140(3), 974-983. DOI: 10.1021/jacs.7b10433. 

• Cover article

 

28. "Near infrared imaging of Mer tyrosine kinase (MerTK) using MERi-SiR reveals tumor associated macrophage uptake in metastatic disease." Miller, M. A.; Kim, E.; Cuccarese, M. F.; Plotkin, A. L.; Prytyskach, M.; Kohler, R. H.; Pittet, M.; Weissleder, R.*  Chem. Commun., 2018, 54, 42–45. DOI: 10.1039/C7CC07581B

 

27. "Neuron-Material Nanointerfaces: Surface Nanotopography Governs Neuronal Differentiation and Development" Kim, H. K.; Kim, E.; Kim. Y.-K.; Kang, K.* ChemNanoMat, 2017, 3, 278–287. DOI: 10.1002/cnma.201700063.

 

26. "Tetrazine ligation for chemical proteomics " Kang, K.; Park, J.*; Kim, E.* Proteome Science 2017, 15, 15. DOI : 10.1186/s12953-017-0121-5.

 

25. "Development of fluorescent mitochondria probe based on 1,2-dihydropyrrolo[3,4-b]indolizine-3-one " Sung, J.; Lee, Y.; Cha, J. H.; Park, S. B.*, Kim, E.* Dyes and Pigments 2017, DOI : 10.1016/j.dyepig.2017.06.014 .

 

24. "Facile coating strategy to functionalize inorganic nanoparticles for biosensing" Park, Y. I.; Kim, E.; Huang, C.-H.; Park, K. S.; Castro, C.; Lee, H.*; Weissleder, R.* Bioconjugate Chem. 2017, 28, 33-37.  PMID : 27792877

 

23. "Quantitating drug-target engagement in single cells in vitro and in vivo." Dubach, J. M.; Kim, E.; Yang, K.; Cuccarese, M.; Giedt, R.; Meimetis, L. G.; Vinegoni C.*; Weissleder, R.* Nat. Chem. Biol. 2017, 13, 168-173. PMID: 27918558

 

22. "Replacement of dialkyl amino group on D-A type fluorophores to increase brightness" Kim, E.* Bull. Kor. Chem. Soc.  2016, 37, 1741-1742. Cover article. 

 

21. "High-content screening platform with fluorescent chemical probes for discovery of first-in-class therapeutics" Jo, A.; Jung, J.; Kim, E.; Park , S. B.* Chem. Commun. 2016, 52, 7433-7445. PMID : 27166145

 

 

20. "Bioorthogonal click chemistry enables synthetic cell-cell adhesion." Koo, H.; Choi, M.; Kim, E.; Hahn, S. K.; Weissleder, R.; Yun, S. -H.* Small, 2015, 11, 6458-6466. PMID : 26768353 Featured as ‘Frontispiece’ in Small.  

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